EnhancerDB
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  3. rs530460872[chr1:203480370]
Enhancers that have rs530460872[chr1:203480370]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs530460872[chr1:203480370]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203479768 203480627 ZNF274 GTRD no Cervix (HeLa-S3) 21369010
chr1 203479781 203481906 ZNF143 GTRD no Epithelial (MCF-7) 21369011
chr1 203479893 203481935 ZNF143 GTRD no Epithelial (MCF-7) 21369012
chr1 203479963 203481349 ZNF274 GTRD no Cervix (HeLa-S3) 21369013
chr1 203479975 203481243 ZNF143 GTRD no Epithelial (MCF-7) 21369014
chr1 203479983 203481140 ZNF143 GTRD no Epithelial (MCF-7) 21369015
chr1 203479998 203481659 ZNF274 GTRD no Cervix (HeLa-S3) 21369016
chr1 203480024 203480542 ZNF274 GTRD no Cervix (HeLa-S3) 21369017
chr1 203480026 203481815 ZNF143 GTRD no Epithelial (MCF-7) 21369018
chr1 203480077 203481590 ZNF274 GTRD no Cervix (HeLa-S3) 21369019
chr1 203480093 203481879 ZNF274 GTRD no Cervix (HeLa-S3) 21369020
chr1 203480152 203481283 ZBTB33 GTRD no Brain (SK-N-SH) 21369021
chr1 203480171 203481527 ZNF143 GTRD no Epithelial (MCF-7) 21369022
chr1 203480177 203481271 ZBTB33 GTRD no Brain (SK-N-SH) 21369023
chr1 203480181 203481349 ZBTB33 GTRD no Brain (SK-N-SH) 21369024
chr1 203480206 203481270 ERG GTRD no Prostate (RWPE1) 21369025
chr1 203480216 203481310 TCF7L2 GTRD no Colon (HCT116) 21369026
chr1 203480228 203481310 ZBTB33 GTRD no Brain (SK-N-SH) 21369027
chr1 203480237 203481196 ZBTB33 GTRD no Brain (SK-N-SH) 21369028
chr1 203480238 203481449 ZBTB33 GTRD no Brain (SK-N-SH) 21369029
chr1 203480243 203481351 ZBTB33 GTRD no Brain (SK-N-SH) 21369030
chr1 203480271 203481200 ZBTB33 GTRD no Brain (SK-N-SH) 21369031
chr1 203480284 203481209 ZBTB33 GTRD no Brain (SK-N-SH) 21369032
chr1 203480297 203481333 ZNF143 GTRD no Epithelial (MCF-7) 21369033
chr1 203480299 203481307 ZNF274 GTRD no Cervix (HeLa-S3) 21369034
chr1 203480301 203481236 ZNF143 GTRD no Epithelial (MCF-7) 21369035
chr1 203480305 203481199 ZBTB33 GTRD no Brain (SK-N-SH) 21369036
chr1 203480328 203481040 ZBTB33 GTRD no Brain (SK-N-SH) 21369037
chr1 203480330 203481242 ZBTB33 GTRD no Brain (SK-N-SH) 21369038
chr1 203480335 203481187 ZBTB33 GTRD no Brain (SK-N-SH) 21369039
chr1 203480347 203481103 ZBTB33 GTRD no Brain (SK-N-SH) 21369040
chr1 203480353 203480919 ZBTB33 GTRD no Brain (SK-N-SH) 21369041
chr1 203480359 203481218 ZBTB33 GTRD no Brain (SK-N-SH) 21369042
chr1 203480370 203481434 ZNF143 GTRD no Epithelial (MCF-7) 21369043
Genes associated with rs530460872[chr1:203480370], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More