EnhancerDB
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  3. rs530532301[chr1:27898235]
Enhancers that have rs530532301[chr1:27898235]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
chr1 27897947 27898332 vista928
VISTA
Transcript factors that have rs530532301[chr1:27898235]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27898227 27898242 NR2C2 JASPAR yes 27710642
chr1 27898227 27898242 NR2C2 JASPAR yes 118258627
chr1 27898227 27898248 ZNF263 JASPAR yes 27710643
chr1 27898227 27898248 ZNF263 JASPAR yes 118258628
chr1 27898228 27898238 SP1 TRANSFAC yes 27710644
chr1 27898228 27898238 SP1 TRANSFAC yes 118258629
chr1 27898229 27898239 SP1 JASPAR yes 27710645
chr1 27898229 27898239 SP1 JASPAR yes 118258630
chr1 27898230 27898236 SP1 TRANSFAC yes 27710646
chr1 27898230 27898236 SP1 TRANSFAC yes 118258631
chr1 27898230 27898240 SP1 JASPAR yes 27710647
chr1 27898230 27898240 SP1 TRANSFAC yes 27710648
chr1 27898230 27898240 SP1 JASPAR yes 118258632
chr1 27898230 27898240 SP1 TRANSFAC yes 118258633
chr1 27898230 27898250 RREB1 JASPAR yes 27710649
chr1 27898230 27898250 RREB1 JASPAR yes 118258634
chr1 27898235 27898241 SP1 TRANSFAC yes 27710650
chr1 27898235 27898241 SP1 TRANSFAC yes 118258635
chr1 27898235 27898245 SP1 JASPAR yes 27710651
chr1 27898235 27898245 SP1 JASPAR yes 118258636
Genes associated with rs530532301[chr1:27898235], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More