EnhancerDB
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  3. rs530729113[chr2:219594490]
Enhancers that have rs530729113[chr2:219594490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 219590580 219600830 enh19242
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs530729113[chr2:219594490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 219594469 219594490 IRF1 JASPAR yes 81010594
chr2 219594470 219594491 IRF1 JASPAR yes 81010597
chr2 219594475 219594490 FOXP1 JASPAR yes 81010601
chr2 219594475 219594496 IRF1 JASPAR yes 81010602
chr2 219594476 219594497 IRF1 JASPAR yes 81010603
chr2 219594477 219594497 RREB1 JASPAR yes 81010605
chr2 219594480 219594495 FOXP1 JASPAR yes 81010607
chr2 219594481 219594502 IRF1 JASPAR yes 81010608
chr2 219594482 219594497 FOXP1 JASPAR yes 81010609
chr2 219594482 219594502 RREB1 JASPAR yes 81010610
chr2 219594482 219594503 IRF1 JASPAR yes 81010611
chr2 219594483 219594498 FOXP1 JASPAR yes 81010612
chr2 219594484 219594499 FOXP1 JASPAR yes 81010613
chr2 219594485 219594500 FOXP1 JASPAR yes 81010614
chr2 219594485 219594506 IRF1 JASPAR yes 81010615
chr2 219594486 219594501 FOXP1 JASPAR yes 81010616
chr2 219594488 219594503 FOXP1 JASPAR yes 81010617
chr2 219594490 219594505 FOXP1 JASPAR yes 81010618
Genes associated with rs530729113[chr2:219594490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More