EnhancerDB
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  3. rs530939900[chr1:229202233]
Enhancers that have rs530939900[chr1:229202233]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229191845 229208275 enh12759
Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Ovary Blood (T-cell) Esophagus Liver Lung (A549) Stomach Placenta Thyroid Uterus Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs530939900[chr1:229202233]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229202226 229202240 SPI1 JASPAR yes 35957305
chr1 229202227 229202237 MZF1 JASPAR yes 35957306
chr1 229202230 229202235 TFAP2A TRANSFAC yes 35957307
chr1 229202230 229202236 MZF1 JASPAR yes 35957308
chr1 229202231 229202242 NFKB1 JASPAR yes 35957309
chr1 229202232 229202237 ETS2 TRANSFAC yes 35957310
chr1 229202232 229202242 NFKB1 JASPAR yes 35957311
chr1 229202232 229202242 REL JASPAR yes 35957312
chr1 229202232 229202243 NFKB1 JASPAR yes 35957313
chr1 229202233 229202243 NFKB1 JASPAR yes 35957314
chr1 229202233 229202243 REL JASPAR yes 35957315
chr1 229202233 229202244 NFKB1 JASPAR yes 35957316
Genes associated with rs530939900[chr1:229202233], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More