EnhancerDB
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  3. rs530949198[chr17:25844488]
Enhancers that have rs530949198[chr17:25844488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25838865 25883455 enh17064
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs530949198[chr17:25844488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25844476 25844491 MEF2A JASPAR yes 53639882
chr17 25844477 25844492 MEF2C JASPAR yes 53639883
chr17 25844478 25844490 MEF2A JASPAR yes 53639884
chr17 25844478 25844490 MEF2B JASPAR yes 53639885
chr17 25844478 25844490 MEF2D JASPAR yes 53639886
Genes associated with rs530949198[chr17:25844488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More