EnhancerDB
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  3. rs531054454[chr2:38937895]
Enhancers that have rs531054454[chr2:38937895]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38916069 38955355 enh5435
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs531054454[chr2:38937895]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38937879 38937897 NR3C1 JASPAR yes 73168403
chr2 38937884 38937895 FLI1 JASPAR yes 73168405
chr2 38937884 38937897 ELF3 JASPAR yes 73168406
chr2 38937885 38937898 ELF1 JASPAR yes 73168408
chr2 38937886 38937907 IRF1 JASPAR yes 73168410
chr2 38937889 38937903 SPI1 JASPAR yes 73168412
chr2 38937889 38937910 IRF1 JASPAR yes 73168413
chr2 38937890 38937911 IRF1 JASPAR yes 73168414
chr2 38937891 38937912 IRF1 JASPAR yes 73168415
chr2 38937892 38937907 FOXP1 JASPAR yes 73168416
chr2 38937892 38937913 IRF1 JASPAR yes 73168417
chr2 38937893 38937914 IRF1 JASPAR yes 73168418
chr2 38937894 38937909 FOXP1 JASPAR yes 73168419
chr2 38937895 38937910 FOXP1 JASPAR yes 73168420
Genes associated with rs531054454[chr2:38937895], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More