EnhancerDB
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  3. rs531196302[chr1:16521624]
Enhancers that have rs531196302[chr1:16521624]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs531196302[chr1:16521624]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16521620 16521635 FOXP1 JASPAR yes 27034644
chr1 16521621 16521636 FOXP1 JASPAR yes 27034645
chr1 16521622 16521637 FOXP1 JASPAR yes 27034646
chr1 16521623 16521638 FOXP1 JASPAR yes 27034647
chr1 16521623 16521644 IRF1 JASPAR yes 27034648
chr1 16521624 16521639 FOXP1 JASPAR yes 27034649
chr1 16521624 16521645 IRF1 JASPAR yes 27034650
Genes associated with rs531196302[chr1:16521624], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More