EnhancerDB
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  3. rs531439505[chr1:19264770]
Enhancers that have rs531439505[chr1:19264770]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19252691 19280920 enh11566
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs531439505[chr1:19264770]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19264764 19264775 CDX2 JASPAR yes 27163601
chr1 19264765 19264776 HOXC11 JASPAR yes 27163602
chr1 19264765 19264776 HOXC12 JASPAR yes 27163603
chr1 19264765 19264776 HOXD12 JASPAR yes 27163604
chr1 19264769 19264777 FOXG1 JASPAR yes 27163605
Genes associated with rs531439505[chr1:19264770], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More