EnhancerDB
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  3. rs531487140[chr1:205282708]
Enhancers that have rs531487140[chr1:205282708]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs531487140[chr1:205282708]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205282529 205283119 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861943
chr1 205282538 205283058 TCF7L2 GTRD no Colon (HCT116) 21371756
chr1 205282538 205283058 TCF7L2 GTRD no Colon (HCT116) 107861944
chr1 205282612 205283042 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861945
chr1 205282650 205283170 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861946
chr1 205282658 205283318 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861947
chr1 205282683 205283259 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861948
chr1 205282698 205283238 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861949
chr1 205282700 205282715 TFAP2A JASPAR yes 34753815
chr1 205282702 205282717 TFAP2A JASPAR yes 34753816
chr1 205282702 205282717 TFAP2C JASPAR yes 34753817
chr1 205282703 205282714 TFAP2A JASPAR yes 34753818
chr1 205282703 205282714 TFAP2B JASPAR yes 34753819
chr1 205282703 205282714 TFAP2C JASPAR yes 34753820
chr1 205282704 205283224 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861950
Genes associated with rs531487140[chr1:205282708], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More