EnhancerDB
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  3. rs531546892[chr5:78054885]
Enhancers that have rs531546892[chr5:78054885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78038905 78058872 enh8512
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs531546892[chr5:78054885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78054868 78054885 RXRA JASPAR yes 63622630
chr5 78054870 78054888 RARA JASPAR yes 63622632
chr5 78054873 78054886 JUN JASPAR yes 63622633
chr5 78054876 78054889 NR2F1 JASPAR yes 63622634
chr5 78054877 78054885 CREB1 JASPAR yes 63622635
Genes associated with rs531546892[chr5:78054885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More