EnhancerDB
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  3. rs531572518[chr1:235245411]
Enhancers that have rs531572518[chr1:235245411]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235240345 235251255 enh12800
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs531572518[chr1:235245411]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235244686 235245504 GATA3 GTRD no Thymus 21403553
chr1 235245214 235245522 ZNF274 GTRD no Liver (HepG2) 21403555
chr1 235245394 235245415 IRF1 JASPAR yes 36349440
chr1 235245395 235245416 IRF1 JASPAR yes 36349442
chr1 235245396 235245411 FOXP1 JASPAR yes 36349443
chr1 235245396 235245417 IRF1 JASPAR yes 36349444
chr1 235245397 235245412 FOXP1 JASPAR yes 36349445
chr1 235245397 235245418 IRF1 JASPAR yes 36349446
chr1 235245398 235245413 FOXP1 JASPAR yes 36349447
chr1 235245398 235245419 IRF1 JASPAR yes 36349448
chr1 235245399 235245414 FOXP1 JASPAR yes 36349449
chr1 235245399 235245420 IRF1 JASPAR yes 36349450
chr1 235245400 235245415 FOXP1 JASPAR yes 36349451
chr1 235245401 235245416 FOXP1 JASPAR yes 36349452
chr1 235245401 235245422 IRF1 JASPAR yes 36349453
chr1 235245402 235245417 FOXP1 JASPAR yes 36349454
chr1 235245402 235245423 IRF1 JASPAR yes 36349455
chr1 235245403 235245418 FOXP1 JASPAR yes 36349456
chr1 235245406 235245421 STAT2 JASPAR yes 36349457
Genes associated with rs531572518[chr1:235245411], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More