EnhancerDB
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  3. rs531675222[chr1:23884897]
Enhancers that have rs531675222[chr1:23884897]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23868685 23885215 enh126
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs531675222[chr1:23884897]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23880452 23886457 POLR2A UCSC Txn Factor no Conserved 107802423
chr1 23880452 23886457 POLR2A UCSC Txn Factor no Conserved 107802424
chr1 23884886 23884897 E2F1 JASPAR yes 27441855
chr1 23884893 23884905 NHLH1 JASPAR yes 27441856
chr1 23884894 23884904 ID4 JASPAR yes 27441857
chr1 23884894 23884904 NHLH1 JASPAR yes 27441858
chr1 23884894 23884904 TCF3 JASPAR yes 27441859
chr1 23884894 23884904 TCF4 JASPAR yes 27441860
chr1 23884895 23884904 SNAI2 JASPAR yes 27441861
chr1 23884896 23884901 USF2 TRANSFAC yes 27441862
Genes associated with rs531675222[chr1:23884897], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More