EnhancerDB
  1. Home
  2. SNP
  3. rs531878402[chr2:28864842]
Enhancers that have rs531878402[chr2:28864842]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28854725 28893200 enh18394
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs531878402[chr2:28864842]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28864836 28864850 GLIS3 JASPAR yes 72662967
chr2 28864839 28864855 ZNF143 JASPAR yes 72662968
chr2 28864842 28864849 ETS1 TRANSFAC yes 72662969
Genes associated with rs531878402[chr2:28864842], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More