EnhancerDB
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  3. rs531896256[chr17:55973036]
Enhancers that have rs531896256[chr17:55973036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs531896256[chr17:55973036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55973034 55973044 GSC2 JASPAR yes 54996152
chr17 55973034 55973044 GSC JASPAR yes 54996153
chr17 55973035 55973043 OTX1 JASPAR yes 54996154
chr17 55973035 55973043 OTX2 JASPAR yes 54996155
chr17 55973035 55973044 PITX3 JASPAR yes 54996156
Genes associated with rs531896256[chr17:55973036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More