EnhancerDB
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  3. rs531949359[chr19:10842998]
Enhancers that have rs531949359[chr19:10842998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10832365 10873258 enh5002
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs531949359[chr19:10842998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10842358 10843009 ZNF274 GTRD no Blood (GM12878) 21848915
chr19 10842358 10843009 ZNF274 GTRD no Blood (GM12878) 108383755
chr19 10842472 10843106 ZNF274 GTRD no Blood (GM12878) 21848919
chr19 10842472 10843106 ZNF274 GTRD no Blood (GM12878) 108383759
chr19 10842977 10842998 IRF1 JASPAR yes 112432962
chr19 10842978 10842999 IRF1 JASPAR yes 112432964
chr19 10842979 10843000 IRF1 JASPAR yes 112432966
chr19 10842984 10842999 FOXP1 JASPAR yes 112432969
chr19 10842987 10842998 FOXP2 JASPAR yes 112432970
Genes associated with rs531949359[chr19:10842998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More