EnhancerDB
  1. Home
  2. SNP
  3. rs532010009[chr17:55490547]
Enhancers that have rs532010009[chr17:55490547]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55477469 55505815 enh4487
Brain (SK-N-MC) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs532010009[chr17:55490547]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55490535 55490550 PRDM1 JASPAR yes 54952564
chr17 55490544 55490548 NFE TRANSFAC yes 54952565
chr17 55490544 55490557 SMAD2 JASPAR yes 54952566
Genes associated with rs532010009[chr17:55490547], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More