EnhancerDB
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  3. rs532074236[chr12:125028946]
Enhancers that have rs532074236[chr12:125028946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs532074236[chr12:125028946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125028638 125029294 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21580964
chr12 125028638 125029294 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108068843
chr12 125028715 125029311 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108068844
chr12 125028779 125029295 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21580965
chr12 125028779 125029295 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108068845
chr12 125028790 125029260 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108068846
chr12 125028876 125029184 GATA2 UCSC Txn Factor no Conserved 108068847
chr12 125028889 125029137 EP300 UCSC Txn Factor no Conserved 108068848
chr12 125028937 125028948 TFAP2A JASPAR yes 82495684
chr12 125028937 125028948 TFAP2B JASPAR yes 82495685
chr12 125028937 125028948 TFAP2C JASPAR yes 82495686
chr12 125028937 125028948 TFAP2A JASPAR yes 124391906
chr12 125028937 125028948 TFAP2B JASPAR yes 124391907
chr12 125028937 125028948 TFAP2C JASPAR yes 124391908
chr12 125028938 125028947 TFAP2A JASPAR yes 82495687
chr12 125028938 125028947 TFAP2A JASPAR yes 124391909
chr12 125028946 125028955 THAP1 JASPAR yes 82495688
chr12 125028946 125028955 THAP1 JASPAR yes 124391910
Genes associated with rs532074236[chr12:125028946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More