EnhancerDB
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  3. rs532102162[chr12:111011946]
Enhancers that have rs532102162[chr12:111011946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 111010145 111019654 enh2593
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell) Heart
Transcript factors that have rs532102162[chr12:111011946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 111011939 111011949 GSX2 JASPAR yes 123703030
chr12 111011939 111011949 HOXB2 JASPAR yes 123703031
chr12 111011939 111011949 HOXB3 JASPAR yes 123703032
chr12 111011939 111011949 MNX1 JASPAR yes 123703033
chr12 111011939 111011949 POU6F1 JASPAR yes 123703034
chr12 111011939 111011950 HOXA10 JASPAR yes 123703035
chr12 111011940 111011948 LMX1A JASPAR yes 123703036
chr12 111011940 111011948 LMX1B JASPAR yes 123703037
chr12 111011940 111011948 NKX6-1 JASPAR yes 123703038
chr12 111011940 111011948 NKX6-2 JASPAR yes 123703039
chr12 111011940 111011948 VAX1 JASPAR yes 123703040
chr12 111011940 111011948 VAX2 JASPAR yes 123703041
chr12 111011940 111011948 VSX1 JASPAR yes 123703042
chr12 111011940 111011948 VSX2 JASPAR yes 123703043
chr12 111011941 111011962 IRF1 JASPAR yes 123703044
chr12 111011942 111011963 IRF1 JASPAR yes 123703045
chr12 111011943 111011958 FOXP1 JASPAR yes 123703046
chr12 111011944 111011959 FOXP1 JASPAR yes 123703047
chr12 111011945 111011951 TBP TRANSFAC yes 123703048
chr12 111011945 111011960 FOXP1 JASPAR yes 123703049
chr12 111011945 111011966 IRF1 JASPAR yes 123703050
chr12 111011946 111011961 FOXP1 JASPAR yes 123703051
chr12 111011946 111011967 IRF1 JASPAR yes 123703052
Genes associated with rs532102162[chr12:111011946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More