EnhancerDB
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  3. rs532148353[chr1:204047099]
Enhancers that have rs532148353[chr1:204047099]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204045525 204080675 enh12573
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs532148353[chr1:204047099]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204047092 204047100 TBX5 JASPAR yes 34676626
chr1 204047092 204047101 ZEB1 JASPAR yes 34676627
chr1 204047092 204047105 ZBTB18 JASPAR yes 34676628
chr1 204047093 204047103 ID4 JASPAR yes 34676629
chr1 204047093 204047103 TCF3 JASPAR yes 34676630
chr1 204047093 204047103 TCF4 JASPAR yes 34676631
chr1 204047095 204047100 USF2 TRANSFAC yes 34676632
Genes associated with rs532148353[chr1:204047099], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More