EnhancerDB
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  3. rs532197949[chr1:227015030]
Enhancers that have rs532197949[chr1:227015030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226990625 227018206 enh975
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 227014699 227016924 vista142
VISTA
Transcript factors that have rs532197949[chr1:227015030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227015025 227015030 TFAP2A TRANSFAC yes 35849115
chr1 227015025 227015030 TFAP2A TRANSFAC yes 71160030
chr1 227015025 227015031 MZF1 JASPAR yes 35849116
chr1 227015025 227015031 MZF1 JASPAR yes 71160031
chr1 227015026 227015041 NR2C2 JASPAR yes 35849117
chr1 227015026 227015041 NR2C2 JASPAR yes 71160032
chr1 227015027 227015041 NR2F1 JASPAR yes 35849118
chr1 227015027 227015041 NR2F1 JASPAR yes 71160033
Genes associated with rs532197949[chr1:227015030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More