EnhancerDB
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  3. rs532255825[chr1:203479180]
Enhancers that have rs532255825[chr1:203479180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs532255825[chr1:203479180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203478336 203479317 ZNF143 GTRD no Epithelial (MCF-7) 21369003
chr1 203478380 203479295 ZNF143 GTRD no Epithelial (MCF-7) 21369006
chr1 203478556 203479304 ZNF143 GTRD no Epithelial (MCF-7) 21369008
chr1 203478976 203479363 ZNF143 GTRD no Epithelial (MCF-7) 21369009
chr1 203479170 203479181 ESRRA JASPAR yes 34633389
chr1 203479170 203479181 ESRRB JASPAR yes 34633390
chr1 203479170 203479183 NR2F1 JASPAR yes 34633391
chr1 203479172 203479180 NR4A2 JASPAR yes 34633392
chr1 203479172 203479190 RARA JASPAR yes 34633393
Genes associated with rs532255825[chr1:203479180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More