EnhancerDB
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  3. rs532417562[chr17:55619732]
Enhancers that have rs532417562[chr17:55619732]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55607567 55641035 enh4490
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr17 55618678 55620173 vista705
VISTA
Transcript factors that have rs532417562[chr17:55619732]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55619436 55619760 CEBPB UCSC Txn Factor no Conserved 107688420
chr17 55619729 55619743 STAT1 JASPAR yes 16249
chr17 55619729 55619743 STAT1 JASPAR yes 54966827
chr17 55619730 55619742 IRF1 JASPAR yes 16250
chr17 55619730 55619742 IRF1 JASPAR yes 54966828
chr17 55619731 55619737 LEF1 TRANSFAC yes 16251
chr17 55619731 55619737 TCF4 TRANSFAC yes 16252
chr17 55619731 55619737 LEF1 TRANSFAC yes 54966829
chr17 55619731 55619737 TCF4 TRANSFAC yes 54966830
Genes associated with rs532417562[chr17:55619732], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More