EnhancerDB
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  3. rs532566402[chr19:13953677]
Enhancers that have rs532566402[chr19:13953677]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs532566402[chr19:13953677]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13949228 13953924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851739
chr19 13949337 13954090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851742
chr19 13951579 13953680 TCF7L2 GTRD no Colon (HCT116) 21851877
chr19 13951635 13954235 ZNF274 GTRD no Blood (GM12878) 21851886
chr19 13951637 13953815 ZNF274 GTRD no Bone Marrow (K562) 21851887
chr19 13951640 13953891 ZNF274 GTRD no Cervix (HeLa-S3) 21851889
chr19 13951646 13953826 ZNF274 GTRD no Bone Marrow (K562) 21851890
chr19 13951772 13953797 ZNF274 GTRD no Bone Marrow (K562) 21851910
chr19 13951794 13953699 ZNF274 GTRD no Bone Marrow (K562) 21851921
chr19 13951823 13953780 ZNF274 GTRD no Bone Marrow (K562) 21851929
chr19 13951838 13954705 TCF7L2 GTRD no Colon (HCT116) 21851938
chr19 13951838 13954705 TCF7L2 GTRD no Colon (HCT116) 108390135
chr19 13951854 13953700 TCF7L2 GTRD no Colon (HCT116) 21851944
chr19 13951887 13954603 TCF7L2 GTRD no Colon (HCT116) 21851957
chr19 13951887 13954603 TCF7L2 GTRD no Colon (HCT116) 108390136
chr19 13951893 13954672 TCF7L2 GTRD no Colon (HCT116) 21851961
chr19 13951893 13954672 TCF7L2 GTRD no Colon (HCT116) 108390137
chr19 13951936 13954470 TCF7L2 GTRD no Colon (HCT116) 21851976
chr19 13951936 13954470 TCF7L2 GTRD no Colon (HCT116) 108390138
chr19 13952028 13953951 ZNF274 GTRD no Bone Marrow (K562) 21852006
chr19 13952122 13953921 ZNF143 GTRD no Epithelial (MCF-7) 21852032
chr19 13952798 13953844 ZNF274 GTRD no Bone Marrow (K562) 21852080
chr19 13952866 13954773 ZNF143 GTRD no Epithelial (MCF-7) 21852081
chr19 13952866 13954773 ZNF143 GTRD no Epithelial (MCF-7) 108390139
chr19 13952867 13953989 AR GTRD no Prostate (PC-3) 21852082
chr19 13952874 13953951 ZNF274 GTRD no Bone Marrow (K562) 21852083
chr19 13952879 13954270 ZNF274 GTRD no Blood (GM12878) 21852084
chr19 13952881 13954705 ZNF143 GTRD no Epithelial (MCF-7) 21852085
chr19 13952881 13954705 ZNF143 GTRD no Epithelial (MCF-7) 108390140
chr19 13952890 13954784 ZNF143 GTRD no Epithelial (MCF-7) 21852086
chr19 13952890 13954784 ZNF143 GTRD no Epithelial (MCF-7) 108390141
chr19 13952897 13953712 ZNF274 GTRD no Bone Marrow (K562) 21852087
chr19 13952912 13953712 ZNF274 GTRD no Bone Marrow (K562) 21852090
chr19 13952920 13953805 ZNF274 GTRD no Bone Marrow (K562) 21852092
chr19 13952929 13953922 ZNF274 GTRD no Bone Marrow (K562) 21852094
chr19 13952950 13953796 ZNF274 GTRD no Bone Marrow (K562) 21852097
chr19 13952977 13953914 ZNF274 GTRD no Cervix (HeLa-S3) 21852099
chr19 13952978 13953908 ZNF143 GTRD no Epithelial (MCF-7) 21852100
chr19 13952979 13953854 ZNF143 GTRD no Epithelial (MCF-7) 21852101
chr19 13952984 13953742 ZNF274 GTRD no Bone Marrow (K562) 21852102
chr19 13953023 13953842 ZNF274 GTRD no Blood (GM12878) 21852106
chr19 13953024 13954807 ZNF143 GTRD no Epithelial (MCF-7) 21852107
chr19 13953024 13954807 ZNF143 GTRD no Epithelial (MCF-7) 108390142
chr19 13953084 13953707 ZNF274 GTRD no Bone Marrow (K562) 21852112
chr19 13953093 13954226 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852114
chr19 13953099 13953823 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852115
chr19 13953103 13953730 ZNF143 GTRD no Epithelial (MCF-7) 21852116
chr19 13953155 13953683 ZNF143 GTRD no Epithelial (MCF-7) 21852122
chr19 13953210 13953690 ZNF274 GTRD no Bone Marrow (K562) 21852132
chr19 13953236 13953727 CTCF GTRD no Lung 21852136
chr19 13953261 13953779 ZNF274 GTRD no Bone Marrow (K562) 21852142
chr19 13953283 13953822 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852143
chr19 13953284 13953780 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852144
chr19 13953288 13953724 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852146
chr19 13953293 13953749 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852147
chr19 13953299 13953875 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852148
chr19 13953307 13953687 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852151
chr19 13953326 13953690 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852154
chr19 13953340 13953776 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852155
chr19 13953371 13953887 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852158
chr19 13953380 13953910 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852159
chr19 13953383 13953947 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852160
chr19 13953420 13953680 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852162
chr19 13953427 13953829 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852163
chr19 13953442 13953966 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852164
chr19 13953450 13953849 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21852165
chr19 13953453 13953953 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852166
chr19 13953456 13953741 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852167
chr19 13953486 13953876 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21852168
chr19 13953509 13953973 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852169
chr19 13953524 13953839 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852170
chr19 13953525 13953929 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852171
chr19 13953526 13953866 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21852172
chr19 13953542 13953922 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852173
chr19 13953543 13953919 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852174
chr19 13953550 13953906 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21852175
chr19 13953551 13953911 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852176
chr19 13953557 13953993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852177
chr19 13953560 13953920 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852178
chr19 13953574 13953800 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852179
chr19 13953574 13953838 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852180
chr19 13953580 13953837 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852181
chr19 13953586 13953846 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852182
chr19 13953604 13953964 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852183
chr19 13953607 13953863 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21852184
chr19 13953620 13953990 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852185
chr19 13953622 13953942 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852186
chr19 13953624 13953782 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852187
chr19 13953631 13953851 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852188
chr19 13953633 13953909 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21852189
chr19 13953644 13954361 ZNF274 GTRD no Blood (GM12878) 21852190
chr19 13953644 13954361 ZNF274 GTRD no Blood (GM12878) 108390143
chr19 13953647 13953801 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21852191
chr19 13953665 13953890 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852192
chr19 13953670 13953909 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852193
chr19 13953672 13953809 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21852194
chr19 13953673 13953830 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21852195
Genes associated with rs532566402[chr19:13953677], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More