EnhancerDB
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  3. rs532599506[chr1:1617755]
Enhancers that have rs532599506[chr1:1617755]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs532599506[chr1:1617755]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1617739 1617760 IRF1 JASPAR yes 26199054
chr1 1617740 1617761 IRF1 JASPAR yes 26199055
chr1 1617741 1617756 PRDM1 JASPAR yes 26199056
chr1 1617744 1617765 IRF1 JASPAR yes 26199057
chr1 1617745 1617760 FOXP1 JASPAR yes 26199058
chr1 1617746 1617761 STAT2 JASPAR yes 26199059
chr1 1617748 1617769 IRF1 JASPAR yes 26199060
chr1 1617749 1617764 FOXP1 JASPAR yes 26199061
chr1 1617749 1617770 IRF1 JASPAR yes 26199062
chr1 1617750 1617765 FOXP1 JASPAR yes 26199063
chr1 1617750 1617771 IRF1 JASPAR yes 26199064
chr1 1617754 1617775 IRF1 JASPAR yes 26199065
chr1 1617755 1617770 FOXP1 JASPAR yes 26199066
chr1 1617755 1617776 IRF1 JASPAR yes 26199067
Genes associated with rs532599506[chr1:1617755], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More