EnhancerDB
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  3. rs532600517[chr1:229231243]
Enhancers that have rs532600517[chr1:229231243]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229225622 229286295 enh12760
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Ovary Esophagus Liver Blood (T-cell) Blood (OCI-LY7) Stomach Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs532600517[chr1:229231243]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 21389897
chr1 229228678 229232083 AR GTRD no Prostate (PC-3) 107877686
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 21389898
chr1 229228744 229232100 ZNF274 GTRD no Cervix (HeLa-S3) 107877687
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 21389900
chr1 229228818 229232486 ZNF274 GTRD no Cervix (HeLa-S3) 107877689
chr1 229228830 229232022 ZBTB33 GTRD no Lung (A549) 107877691
chr1 229228877 229232149 ZBTB33 GTRD no Lung (A549) 107877698
chr1 229228881 229232191 ZBTB33 GTRD no Lung (A549) 107877700
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 21389909
chr1 229228899 229232080 ZNF274 GTRD no Cervix (HeLa-S3) 107877703
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 21389915
chr1 229228986 229232108 ZNF274 GTRD no Cervix (HeLa-S3) 107877710
chr1 229230243 229231728 ZNF143 GTRD no Epithelial (MCF-7) 21389946
chr1 229230279 229231743 ZNF143 GTRD no Epithelial (MCF-7) 21389950
chr1 229230300 229231826 ZNF143 GTRD no Epithelial (MCF-7) 21389951
chr1 229230315 229231963 ZNF143 GTRD no Epithelial (MCF-7) 21389954
chr1 229230336 229231805 ZNF143 GTRD no Epithelial (MCF-7) 21389955
chr1 229230348 229231906 ZNF274 GTRD no Cervix (HeLa-S3) 21389956
chr1 229230355 229231922 ZNF143 GTRD no Epithelial (MCF-7) 21389957
chr1 229230412 229232073 ZNF274 GTRD no Cervix (HeLa-S3) 21389958
chr1 229230494 229231580 ZNF274 GTRD no Cervix (HeLa-S3) 21389966
chr1 229231034 229231729 ZNF143 GTRD no Epithelial (MCF-7) 21389995
chr1 229231034 229231814 ZNF274 GTRD no Cervix (HeLa-S3) 21389996
chr1 229231054 229231733 ZNF143 GTRD no Epithelial (MCF-7) 21389997
chr1 229231172 229231588 ZNF143 GTRD no Epithelial (MCF-7) 21389998
chr1 229231181 229231983 ZNF274 GTRD no Cervix (HeLa-S3) 21389999
chr1 229231184 229231955 ZNF274 GTRD no Cervix (HeLa-S3) 21390000
chr1 229231223 229231244 IRF1 JASPAR yes 35959613
chr1 229231223 229231244 ZNF263 JASPAR yes 35959614
chr1 229231225 229231246 IRF1 JASPAR yes 35959616
chr1 229231226 229231247 ZNF263 JASPAR yes 35959617
chr1 229231229 229231250 ZNF263 JASPAR yes 35959618
chr1 229231230 229231251 ZNF263 JASPAR yes 35959619
chr1 229231231 229231252 IRF1 JASPAR yes 35959620
chr1 229231233 229231248 PRDM1 JASPAR yes 35959621
chr1 229231233 229231248 STAT2 JASPAR yes 35959622
chr1 229231233 229231254 ZNF263 JASPAR yes 35959623
chr1 229231234 229231248 STAT1 JASPAR yes 35959624
chr1 229231235 229231249 IRF7 JASPAR yes 35959625
chr1 229231235 229231249 IRF8 JASPAR yes 35959626
chr1 229231235 229231250 IRF9 JASPAR yes 35959627
chr1 229231235 229231256 IRF1 JASPAR yes 35959628
chr1 229231236 229231257 ZNF263 JASPAR yes 35959629
chr1 229231237 229231258 IRF1 JASPAR yes 35959630
chr1 229231237 229231258 ZNF263 JASPAR yes 35959631
chr1 229231240 229231261 ZNF263 JASPAR yes 35959632
chr1 229231242 229231257 LEF1 JASPAR yes 35959633
chr1 229231242 229231263 IRF1 JASPAR yes 35959634
chr1 229231243 229231257 TCF7L2 JASPAR yes 35959635
Genes associated with rs532600517[chr1:229231243], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More