EnhancerDB
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  3. rs532649093[chr17:59398263]
Enhancers that have rs532649093[chr17:59398263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs532649093[chr17:59398263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59396443 59400405 ZNF143 GTRD no Epithelial (MCF-7) 21777324
chr17 59396443 59400405 ZNF143 GTRD no Epithelial (MCF-7) 108279396
chr17 59398257 59398269 HES5 JASPAR yes 55147984
chr17 59398258 59398268 BHLHE40 JASPAR yes 55147985
chr17 59398258 59398268 CLOCK JASPAR yes 55147986
chr17 59398258 59398268 HEY1 JASPAR yes 55147987
chr17 59398258 59398268 MAX JASPAR yes 55147988
chr17 59398258 59398268 MNT JASPAR yes 55147989
chr17 59398260 59398265 MYC TRANSFAC yes 55147990
chr17 59398260 59398265 USF1 TRANSFAC yes 55147991
chr17 59398260 59398265 USF2 TRANSFAC yes 55147992
Genes associated with rs532649093[chr17:59398263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More