EnhancerDB
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  3. rs532716081[chr12:50919157]
Enhancers that have rs532716081[chr12:50919157]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs532716081[chr12:50919157]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50919139 50919160 IRF1 JASPAR yes 120838154
chr12 50919140 50919161 IRF1 JASPAR yes 120838156
chr12 50919141 50919162 IRF1 JASPAR yes 120838158
chr12 50919142 50919157 FOXP1 JASPAR yes 120838159
chr12 50919142 50919163 IRF1 JASPAR yes 120838160
chr12 50919143 50919158 FOXP1 JASPAR yes 120838161
chr12 50919144 50919159 FOXP1 JASPAR yes 120838162
chr12 50919148 50919163 FOXP1 JASPAR yes 120838164
Genes associated with rs532716081[chr12:50919157], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More