EnhancerDB
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  3. rs532820280[chr12:92170963]
Enhancers that have rs532820280[chr12:92170963]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 92164305 92177155 enh14875
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Ovary Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs532820280[chr12:92170963]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 92170145 92173899 ZNF274 GTRD no Blood (GM12878) 108048869
chr12 92170145 92173899 ZNF274 GTRD no Blood (GM12878) 108048870
chr12 92170948 92170967 PAX5 JASPAR yes 122703369
chr12 92170957 92170978 IRF1 JASPAR yes 122703370
chr12 92170958 92170979 IRF1 JASPAR yes 122703371
chr12 92170960 92170981 IRF1 JASPAR yes 122703372
chr12 92170962 92170977 FOXP1 JASPAR yes 122703373
chr12 92170962 92170983 IRF1 JASPAR yes 122703374
chr12 92170963 92170978 FOXP1 JASPAR yes 122703375
Genes associated with rs532820280[chr12:92170963], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More