EnhancerDB
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  3. rs532945024[chr19:13953064]
Enhancers that have rs532945024[chr19:13953064]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13941465 13967615 enh5016
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs532945024[chr19:13953064]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390133
chr19 13948875 13955635 POLR2A UCSC Txn Factor no Conserved 108390134
chr19 13949228 13953924 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21851739
chr19 13949337 13954090 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21851742
chr19 13951579 13953680 TCF7L2 GTRD no Colon (HCT116) 21851877
chr19 13951635 13954235 ZNF274 GTRD no Blood (GM12878) 21851886
chr19 13951637 13953815 ZNF274 GTRD no Bone Marrow (K562) 21851887
chr19 13951640 13953891 ZNF274 GTRD no Cervix (HeLa-S3) 21851889
chr19 13951646 13953826 ZNF274 GTRD no Bone Marrow (K562) 21851890
chr19 13951679 13953534 ZNF274 GTRD no Blood (GM12878) 21851895
chr19 13951684 13953486 ZNF274 GTRD no Blood (GM12878) 21851897
chr19 13951772 13953797 ZNF274 GTRD no Bone Marrow (K562) 21851910
chr19 13951794 13953699 ZNF274 GTRD no Bone Marrow (K562) 21851921
chr19 13951823 13953780 ZNF274 GTRD no Bone Marrow (K562) 21851929
chr19 13951831 13953250 TCF7L2 GTRD no Colon (HCT116) 21851935
chr19 13951838 13954705 TCF7L2 GTRD no Colon (HCT116) 21851938
chr19 13951838 13954705 TCF7L2 GTRD no Colon (HCT116) 108390135
chr19 13951854 13953700 TCF7L2 GTRD no Colon (HCT116) 21851944
chr19 13951871 13953162 TCF7L2 GTRD no Colon (HCT116) 21851951
chr19 13951887 13954603 TCF7L2 GTRD no Colon (HCT116) 21851957
chr19 13951887 13954603 TCF7L2 GTRD no Colon (HCT116) 108390136
chr19 13951893 13954672 TCF7L2 GTRD no Colon (HCT116) 21851961
chr19 13951893 13954672 TCF7L2 GTRD no Colon (HCT116) 108390137
chr19 13951917 13953672 ZNF274 GTRD no Bone Marrow (K562) 21851968
chr19 13951936 13954470 TCF7L2 GTRD no Colon (HCT116) 21851976
chr19 13951936 13954470 TCF7L2 GTRD no Colon (HCT116) 108390138
chr19 13952028 13953951 ZNF274 GTRD no Bone Marrow (K562) 21852006
chr19 13952122 13953921 ZNF143 GTRD no Epithelial (MCF-7) 21852032
chr19 13952213 13953203 TCF7L2 GTRD no Colon (HCT116) 21852051
chr19 13952455 13953659 ZNF274 GTRD no Bone Marrow (K562) 21852075
chr19 13952518 13953362 TCF7L2 GTRD no Colon (HCT116) 21852077
chr19 13952798 13953844 ZNF274 GTRD no Bone Marrow (K562) 21852080
chr19 13952866 13954773 ZNF143 GTRD no Epithelial (MCF-7) 21852081
chr19 13952866 13954773 ZNF143 GTRD no Epithelial (MCF-7) 108390139
chr19 13952867 13953989 AR GTRD no Prostate (PC-3) 21852082
chr19 13952874 13953951 ZNF274 GTRD no Bone Marrow (K562) 21852083
chr19 13952879 13954270 ZNF274 GTRD no Blood (GM12878) 21852084
chr19 13952881 13954705 ZNF143 GTRD no Epithelial (MCF-7) 21852085
chr19 13952881 13954705 ZNF143 GTRD no Epithelial (MCF-7) 108390140
chr19 13952890 13954784 ZNF143 GTRD no Epithelial (MCF-7) 21852086
chr19 13952890 13954784 ZNF143 GTRD no Epithelial (MCF-7) 108390141
chr19 13952897 13953712 ZNF274 GTRD no Bone Marrow (K562) 21852087
chr19 13952900 13953516 ZNF274 GTRD no Blood (GM12878) 21852088
chr19 13952903 13953341 ZNF274 GTRD no Blood (GM12878) 21852089
chr19 13952912 13953712 ZNF274 GTRD no Bone Marrow (K562) 21852090
chr19 13952914 13953266 ZNF274 GTRD no Blood (GM12878) 21852091
chr19 13952920 13953805 ZNF274 GTRD no Bone Marrow (K562) 21852092
chr19 13952925 13953588 ZNF274 GTRD no Bone Marrow (K562) 21852093
chr19 13952929 13953922 ZNF274 GTRD no Bone Marrow (K562) 21852094
chr19 13952941 13953204 ZNF274 GTRD no Bone Marrow (K562) 21852095
chr19 13952950 13953190 ZNF274 GTRD no Bone Marrow (K562) 21852096
chr19 13952950 13953796 ZNF274 GTRD no Bone Marrow (K562) 21852097
chr19 13952962 13953618 ZNF274 GTRD no Bone Marrow (K562) 21852098
chr19 13952977 13953914 ZNF274 GTRD no Cervix (HeLa-S3) 21852099
chr19 13952978 13953908 ZNF143 GTRD no Epithelial (MCF-7) 21852100
chr19 13952979 13953854 ZNF143 GTRD no Epithelial (MCF-7) 21852101
chr19 13952984 13953742 ZNF274 GTRD no Bone Marrow (K562) 21852102
chr19 13952986 13953612 ZBTB33 GTRD no Brain (SK-N-SH) 21852103
chr19 13952990 13953665 ZNF274 GTRD no Bone Marrow (K562) 21852104
chr19 13953002 13953518 ZNF274 GTRD no Blood (GM12878) 21852105
chr19 13953023 13953842 ZNF274 GTRD no Blood (GM12878) 21852106
chr19 13953024 13954807 ZNF143 GTRD no Epithelial (MCF-7) 21852107
chr19 13953024 13954807 ZNF143 GTRD no Epithelial (MCF-7) 108390142
chr19 13953032 13953556 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21852108
chr19 13953058 13953624 ZNF274 GTRD no Bone Marrow (K562) 21852109
chr19 13953062 13953082 RREB1 JASPAR yes 112537004
chr19 13953063 13953073 ZNF740 JASPAR yes 112537005
chr19 13953063 13953084 ZNF263 JASPAR yes 112537006
chr19 13953064 13953074 ZNF740 JASPAR yes 112537007
chr19 13953064 13953293 ZNF274 GTRD no Bone Marrow (K562) 21852110
Genes associated with rs532945024[chr19:13953064], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More