EnhancerDB
  1. Home
  2. SNP
  3. rs532959623[chr1:28754268]
Enhancers that have rs532959623[chr1:28754268]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28732865 28757735 enh186
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Blood (GM12878) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs532959623[chr1:28754268]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28754262 28754277 NR2C2 JASPAR yes 27770428
chr1 28754265 28754269 LFA1 TRANSFAC yes 27770429
Genes associated with rs532959623[chr1:28754268], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More