EnhancerDB
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  3. rs533082208[chr2:101738940]
Enhancers that have rs533082208[chr2:101738940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 101719143 101748878 enh18758
Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533082208[chr2:101738940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 101738920 101738941 IRF1 JASPAR yes 75789194
chr2 101738922 101738943 IRF1 JASPAR yes 75789196
chr2 101738926 101738940 IRF7 JASPAR yes 75789197
chr2 101738926 101738941 IRF9 JASPAR yes 75789198
chr2 101738926 101738947 IRF1 JASPAR yes 75789199
chr2 101738928 101738949 IRF1 JASPAR yes 75789200
chr2 101738929 101738942 POU2F2 JASPAR yes 75789201
chr2 101738935 101738949 ONECUT3 JASPAR yes 75789202
chr2 101738937 101738941 YY1 TRANSFAC yes 75789203
chr2 101738940 101738950 NFAT4 TRANSFAC yes 75789204
Genes associated with rs533082208[chr2:101738940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More