EnhancerDB
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  3. rs533153559[chr18:56210266]
Enhancers that have rs533153559[chr18:56210266]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56204885 56211735 enh4869
Liver Astrocyte Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs533153559[chr18:56210266]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56210257 56210267 PAX3 JASPAR yes 110957177
chr18 56210257 56210267 PAX7 JASPAR yes 110957178
chr18 56210257 56210268 PROP1 JASPAR yes 110957179
chr18 56210258 56210276 SRF JASPAR yes 110957180
chr18 56210259 56210274 MEF2C JASPAR yes 110957181
chr18 56210261 56210273 SRF JASPAR yes 110957182
chr18 56210262 56210266 YY1 TRANSFAC yes 110957183
chr18 56210264 56210278 ONECUT2 JASPAR yes 110957184
chr18 56210264 56210278 ONECUT3 JASPAR yes 110957185
Genes associated with rs533153559[chr18:56210266], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More