EnhancerDB
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  3. rs533232405[chr17:2857559]
Enhancers that have rs533232405[chr17:2857559]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2849745 2866995 enh4215
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs533232405[chr17:2857559]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2857545 2857564 REST JASPAR yes 52789208
chr17 2857550 2857560 SP1 JASPAR yes 52789209
chr17 2857553 2857562 HIC2 JASPAR yes 52789210
Genes associated with rs533232405[chr17:2857559], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More