EnhancerDB
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  3. rs533294248[chr1:201713244]
Enhancers that have rs533294248[chr1:201713244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201710292 201749335 enh12527
Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Thyroid Uterus Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs533294248[chr1:201713244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201711159 201716773 ZNF274 GTRD no Cervix (HeLa-S3) 21365291
chr1 201711159 201716773 ZNF274 GTRD no Cervix (HeLa-S3) 107857068
chr1 201711501 201715159 ZNF143 GTRD no Epithelial (MCF-7) 107857070
chr1 201711660 201713990 ZNF274 GTRD no Bone Marrow (K562) 107857072
chr1 201711669 201715412 ZNF143 GTRD no Epithelial (MCF-7) 107857073
chr1 201711731 201715165 ZNF274 GTRD no Cervix (HeLa-S3) 21365293
chr1 201711731 201715165 ZNF274 GTRD no Cervix (HeLa-S3) 107857074
chr1 201713226 201713244 RARA JASPAR yes 34527358
chr1 201713233 201713246 NR2F1 JASPAR yes 34527359
chr1 201713237 201713245 CREB1 JASPAR yes 34527360
chr1 201713241 201713251 SREBF2 JASPAR yes 34527361
chr1 201713241 201713252 USF1 JASPAR yes 34527362
chr1 201713241 201713252 USF2 JASPAR yes 34527363
chr1 201713244 201713257 NFKB1 JASPAR yes 34527364
Genes associated with rs533294248[chr1:201713244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More