EnhancerDB
  1. Home
  2. SNP
  3. rs533340305[chr12:46869611]
Enhancers that have rs533340305[chr12:46869611]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533340305[chr12:46869611]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46869611 46869620 LEF1 TRANSFAC yes 120626480
chr12 46869611 46869629 IRF2 JASPAR yes 120626481
Genes associated with rs533340305[chr12:46869611], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More