EnhancerDB
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  3. rs533340333[chr16:85363360]
Enhancers that have rs533340333[chr16:85363360]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533340333[chr16:85363360]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85362390 85366591 ZNF143 GTRD no Epithelial (MCF-7) 21723718
chr16 85362569 85364020 TCF7L2 GTRD no Colon (HCT116) 21723722
chr16 85362834 85363504 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723727
chr16 85362886 85363798 ZNF274 GTRD no Bone Marrow (K562) 21723728
chr16 85363054 85365742 ZNF143 GTRD no Epithelial (MCF-7) 21723732
chr16 85363066 85363954 ZNF274 GTRD no Bone Marrow (K562) 21723733
chr16 85363083 85364469 TCF7L2 GTRD no Colon (HCT116) 21723734
chr16 85363117 85364329 ZNF143 GTRD no Epithelial (MCF-7) 21723735
chr16 85363120 85364035 ZNF143 GTRD no Epithelial (MCF-7) 21723736
chr16 85363138 85363954 ZNF274 GTRD no Bone Marrow (K562) 21723737
chr16 85363147 85363475 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21723738
chr16 85363160 85363647 ZNF274 GTRD no Bone Marrow (K562) 21723739
chr16 85363164 85363454 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21723740
chr16 85363179 85363439 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21723741
chr16 85363190 85364441 ZNF143 GTRD no Epithelial (MCF-7) 21723742
chr16 85363194 85363419 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21723743
chr16 85363202 85364101 ZNF143 GTRD no Epithelial (MCF-7) 21723744
chr16 85363204 85363484 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21723745
chr16 85363308 85364012 ZNF274 GTRD no Bone Marrow (K562) 21723746
chr16 85363340 85363981 ZNF274 GTRD no Bone Marrow (K562) 21723747
chr16 85363357 85363366 ZEB1 JASPAR yes 12048366
chr16 85363357 85363369 NHLH1 JASPAR yes 12048367
chr16 85363358 85363368 ID4 JASPAR yes 12048368
chr16 85363358 85363368 NHLH1 JASPAR yes 12048369
chr16 85363358 85363368 TCF3 JASPAR yes 12048370
chr16 85363358 85363368 TCF4 JASPAR yes 12048371
chr16 85363359 85363368 SNAI2 JASPAR yes 12048372
chr16 85363360 85363365 USF2 TRANSFAC yes 12048373
Genes associated with rs533340333[chr16:85363360], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More