EnhancerDB
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  3. rs533345858[chr2:27956797]
Enhancers that have rs533345858[chr2:27956797]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27941049 27963575 enh18376
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs533345858[chr2:27956797]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27956787 27956808 IRF1 JASPAR yes 72586842
chr2 27956789 27956804 PRDM1 JASPAR yes 72586843
chr2 27956789 27956804 STAT2 JASPAR yes 72586844
chr2 27956790 27956804 SPI1 JASPAR yes 72586845
chr2 27956790 27956804 SPIC JASPAR yes 72586846
chr2 27956790 27956804 STAT1 JASPAR yes 72586847
chr2 27956791 27956805 IRF7 JASPAR yes 72586848
chr2 27956791 27956806 IRF9 JASPAR yes 72586849
Genes associated with rs533345858[chr2:27956797], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More