EnhancerDB
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  3. rs533358539[chr12:125037027]
Enhancers that have rs533358539[chr12:125037027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533358539[chr12:125037027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125037021 125037031 RORA JASPAR yes 124393033
chr12 125037022 125037033 ESRRA JASPAR yes 124393034
chr12 125037022 125037033 ESRRB JASPAR yes 124393035
chr12 125037022 125037035 NR2F1 JASPAR yes 124393036
chr12 125037024 125037032 NR4A2 JASPAR yes 124393037
chr12 125037026 125037030 ESR1 TRANSFAC yes 124393038
Genes associated with rs533358539[chr12:125037027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More