EnhancerDB
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  3. rs533384616[chr1:180490402]
Enhancers that have rs533384616[chr1:180490402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 180482964 180504974 enh12423
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs533384616[chr1:180490402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 180489779 180490857 TEF1 GTRD no Bone (Osteoblast) 21353313
chr1 180489961 180490442 ZNF274 GTRD no Bone Marrow (K562) 21353315
chr1 180489983 180490429 ZNF274 GTRD no Liver (HepG2) 21353317
chr1 180490393 180490405 HINFP JASPAR yes 33520339
chr1 180490397 180490405 SP1 TRANSFAC yes 33520340
chr1 180490397 180490407 SP1 JASPAR yes 33520341
Genes associated with rs533384616[chr1:180490402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More