EnhancerDB
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  3. rs533409380[chr6:34930566]
Enhancers that have rs533409380[chr6:34930566]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34911225 34934612 enh9072
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Ovary Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Adrenal Spleen Muscle (Myotube) Neural Stem Cells (H9) Pancreas (Panc1) Heart
Transcript factors that have rs533409380[chr6:34930566]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34930563 34930577 IRF7 JASPAR yes 101252980
chr6 34930564 34930579 STAT2 JASPAR yes 101252981
chr6 34930565 34930577 IRF1 JASPAR yes 101252982
chr6 34930565 34930580 FOXP1 JASPAR yes 101252983
chr6 34930565 34930586 IRF1 JASPAR yes 101252984
Genes associated with rs533409380[chr6:34930566], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More