EnhancerDB
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  3. rs533429420[chr1:2166709]
Enhancers that have rs533429420[chr1:2166709]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2162230 2193653 enh11423
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533429420[chr1:2166709]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2166698 2166716 RARA JASPAR yes 26224928
chr1 2166705 2166718 NR2F1 JASPAR yes 26224929
chr1 2166709 2166717 CREB1 JASPAR yes 26224930
Genes associated with rs533429420[chr1:2166709], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More