EnhancerDB
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  3. rs533493260[chr12:113673661]
Enhancers that have rs533493260[chr12:113673661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 113663085 113691755 enh2610
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533493260[chr12:113673661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 113673659 113673669 GSC2 JASPAR yes 123818480
chr12 113673659 113673669 GSC JASPAR yes 123818481
chr12 113673660 113673668 OTX1 JASPAR yes 123818482
chr12 113673660 113673668 OTX2 JASPAR yes 123818483
chr12 113673660 113673669 PITX3 JASPAR yes 123818484
Genes associated with rs533493260[chr12:113673661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More