EnhancerDB
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  3. rs533495871[chr16:89380859]
Enhancers that have rs533495871[chr16:89380859]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89371847 89409975 enh16905
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533495871[chr16:89380859]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89380391 89381065 ZNF274 GTRD no Blood (GM12878) 21738056
chr16 89380391 89381065 ZNF274 GTRD no Blood (GM12878) 108225499
chr16 89380522 89381458 TCF7L2 GTRD no Colon (HCT116) 21738057
chr16 89380522 89381458 TCF7L2 GTRD no Colon (HCT116) 108225500
chr16 89380548 89381204 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21738058
chr16 89380548 89381204 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108225501
chr16 89380635 89381235 ZNF143 GTRD no Epithelial (MCF-7) 21738059
chr16 89380635 89381235 ZNF143 GTRD no Epithelial (MCF-7) 108225502
chr16 89380660 89381327 TCF7L2 GTRD no Colon (HCT116) 21738060
chr16 89380660 89381327 TCF7L2 GTRD no Colon (HCT116) 108225503
chr16 89380661 89381074 TCF7L2 GTRD no Colon (HCT116) 21738061
chr16 89380661 89381074 TCF7L2 GTRD no Colon (HCT116) 108225504
chr16 89380830 89381140 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21738062
chr16 89380830 89381140 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108225505
chr16 89380851 89380863 NHLH1 JASPAR yes 12329991
chr16 89380852 89380862 NHLH1 JASPAR yes 12329992
Genes associated with rs533495871[chr16:89380859], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More