EnhancerDB
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  3. rs533499786[chr1:206895401]
Enhancers that have rs533499786[chr1:206895401]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 206857225 206902007 enh27440
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs533499786[chr1:206895401]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 206893851 206898069 ZNF143 GTRD no Epithelial (MCF-7) 21372573
chr1 206893851 206898069 ZNF143 GTRD no Epithelial (MCF-7) 107863399
chr1 206894644 206897154 ZNF143 GTRD no Epithelial (MCF-7) 21372574
chr1 206894644 206897154 ZNF143 GTRD no Epithelial (MCF-7) 107863400
chr1 206894865 206897401 ZNF274 GTRD no Cervix (HeLa-S3) 21372575
chr1 206894865 206897401 ZNF274 GTRD no Cervix (HeLa-S3) 107863401
chr1 206894969 206897738 ZNF274 GTRD no Cervix (HeLa-S3) 21372576
chr1 206894969 206897738 ZNF274 GTRD no Cervix (HeLa-S3) 107863402
chr1 206895386 206895407 IRF1 JASPAR yes 34822386
chr1 206895388 206895403 IRF9 JASPAR yes 34822387
chr1 206895389 206895403 IRF8 JASPAR yes 34822388
chr1 206895390 206895405 PRDM1 JASPAR yes 34822389
chr1 206895390 206895408 IRF2 JASPAR yes 34822390
Genes associated with rs533499786[chr1:206895401], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More