EnhancerDB
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  3. rs533514961[chr17:78765870]
Enhancers that have rs533514961[chr17:78765870]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78745025 78774551 enh4637
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs533514961[chr17:78765870]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78765859 78765876 RXRA JASPAR yes 56280264
chr17 78765862 78765877 ZBTB33 JASPAR yes 56280265
chr17 78765864 78765874 SREBF1 JASPAR yes 56280266
chr17 78765864 78765874 SREBF2 JASPAR yes 56280267
chr17 78765869 78765877 NR4A2 JASPAR yes 56280268
Genes associated with rs533514961[chr17:78765870], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More