EnhancerDB
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  3. rs533534717[chr17:40568159]
Enhancers that have rs533534717[chr17:40568159]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40556065 40574459 enh17161
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533534717[chr17:40568159]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40568153 40568162 SNAI2 JASPAR yes 54303417
chr17 40568153 40568163 ID4 JASPAR yes 54303418
chr17 40568156 40568169 NFKB1 JASPAR yes 54303419
chr17 40568158 40568164 ZNF354C JASPAR yes 54303420
Genes associated with rs533534717[chr17:40568159], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More