EnhancerDB
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  3. rs533554112[chr1:224680163]
Enhancers that have rs533554112[chr1:224680163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 224679026 224701215 enh12719
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533554112[chr1:224680163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 224680159 224680173 FOXF2 JASPAR yes 35706277
chr1 224680160 224680171 FOXA1 JASPAR yes 35706278
chr1 224680160 224680175 FOXA1 JASPAR yes 35706279
chr1 224680161 224680168 NKX3-1 JASPAR yes 35706280
chr1 224680161 224680172 FOXB1 JASPAR yes 35706281
chr1 224680161 224680172 FOXC1 JASPAR yes 35706282
chr1 224680161 224680173 FOXC2 JASPAR yes 35706283
Genes associated with rs533554112[chr1:224680163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More