EnhancerDB
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  3. rs533572692[chr16:85594193]
Enhancers that have rs533572692[chr16:85594193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85541745 85623813 enh16872
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533572692[chr16:85594193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85592360 85594536 ZNF274 GTRD no Bone Marrow (K562) 21729152
chr16 85592815 85594526 TCF7L2 GTRD no Colon (HCT116) 21729195
chr16 85593773 85594682 TCF7L2 GTRD no Colon (HCT116) 21729203
chr16 85593846 85594538 TCF7L2 GTRD no Colon (HCT116) 21729204
chr16 85593978 85594499 TCF7L2 GTRD no Colon (HCT116) 21729205
chr16 85594063 85594441 TCF7L2 GTRD no Colon (HCT116) 21729206
chr16 85594187 85594197 TBX21 JASPAR yes 12076503
chr16 85594187 85594198 TBX2 JASPAR yes 12076504
chr16 85594187 85594200 EOMES JASPAR yes 12076505
chr16 85594188 85594198 TBR1 JASPAR yes 12076506
Genes associated with rs533572692[chr16:85594193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More