EnhancerDB
  1. Home
  2. SNP
  3. rs533646841[chr17:59393452]
Enhancers that have rs533646841[chr17:59393452]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 59383635 59420035 enh17269
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs533646841[chr17:59393452]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 59393441 59393452 USF1 JASPAR yes 55147319
chr17 59393441 59393452 USF2 JASPAR yes 55147320
chr17 59393442 59393452 SREBF2 JASPAR yes 55147321
chr17 59393447 59393460 NR2F1 JASPAR yes 55147323
chr17 59393448 59393456 CREB1 JASPAR yes 55147324
chr17 59393451 59393455 ESR1 TRANSFAC yes 55147325
Genes associated with rs533646841[chr17:59393452], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More