EnhancerDB
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  3. rs533664006[chr1:27048928]
Enhancers that have rs533664006[chr1:27048928]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27041525 27053715 enh11655
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533664006[chr1:27048928]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27048924 27048937 NFKB1 JASPAR yes 27653125
chr1 27048924 27048937 NFKB2 JASPAR yes 27653126
chr1 27048927 27048938 CEBPB JASPAR yes 27653127
Genes associated with rs533664006[chr1:27048928], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More